2016-03-28 20:08:54,196 INFO [default] reading "../opentree5.0/cleaned_ott/cleaned_ott.tre"... 2016-03-28 20:08:54,512 WARN [default] Unexpected continuation of a label after a quoted string in newick. Next character is: "p" 2016-03-28 20:09:01,115 INFO [default] reading "../opentree5.0/labelled_supertree/labelled_supertree.tre"... 2016-03-28 20:09:06,946 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2827@tree6577.tre"... 2016-03-28 20:09:06,948 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_761@tree1415.tre"... 2016-03-28 20:09:06,949 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_77@tree5878.tre"... 2016-03-28 20:09:06,949 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_754@tree1392.tre"... 2016-03-28 20:09:06,951 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_330@tree325.tre"... 2016-03-28 20:09:06,951 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1131@tree2265.tre"... 2016-03-28 20:09:06,954 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2608@tree6288.tre"... 2016-03-28 20:09:07,421 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2539@tree6294.tre"... 2016-03-28 20:09:11,272 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2645@tree6165.tre"... 2016-03-28 20:09:11,274 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2644@tree6164.tre"... 2016-03-28 20:09:11,285 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2642@tree6161.tre"... 2016-03-28 20:09:11,288 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2626@tree6142.tre"... 2016-03-28 20:09:11,291 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_332@tree333.tre"... 2016-03-28 20:09:11,291 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2832@tree6586.tre"... 2016-03-28 20:09:11,291 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1866@tree3765.tre"... 2016-03-28 20:09:11,294 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_59@tree5731.tre"... 2016-03-28 20:09:11,295 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_704@tree1266.tre"... 2016-03-28 20:09:11,298 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2638@tree6157.tre"... 2016-03-28 20:09:11,299 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1974@tree4038.tre"... 2016-03-28 20:09:11,300 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1974@tree4039.tre"... 2016-03-28 20:09:11,301 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2901@tree6721.tre"... 2016-03-28 20:09:11,304 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2906@tree6730.tre"... 2016-03-28 20:09:11,306 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1524@tree3046.tre"... 2016-03-28 20:09:11,309 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1414@tree2837.tre"... 2016-03-28 20:09:11,309 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1411@tree5110.tre"... 2016-03-28 20:09:11,310 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1409@tree2822.tre"... 2016-03-28 20:09:11,310 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1408@tree2821.tre"... 2016-03-28 20:09:11,310 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1407@tree2818.tre"... 2016-03-28 20:09:11,311 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1401@tree2812.tre"... 2016-03-28 20:09:11,311 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1391@tree2795.tre"... 2016-03-28 20:09:11,312 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1434@tree2876.tre"... 2016-03-28 20:09:11,313 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2633@tree6153.tre"... 2016-03-28 20:09:11,314 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1539@tree3088.tre"... 2016-03-28 20:09:11,318 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2634@tree6154.tre"... 2016-03-28 20:09:11,319 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1022@tree1967.tre"... 2016-03-28 20:09:11,319 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_562@tree817.tre"... 2016-03-28 20:09:11,320 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_588@tree878.tre"... 2016-03-28 20:09:11,376 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2048@tree4220.tre"... 2016-03-28 20:09:11,379 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1137@tree2295.tre"... 2016-03-28 20:09:11,380 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_62@tree2878.tre"... 2016-03-28 20:09:11,380 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2841@tree6597.tre"... 2016-03-28 20:09:11,380 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2085@tree4317.tre"... 2016-03-28 20:09:11,385 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_180@tree794.tre"... 2016-03-28 20:09:11,392 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_576@tree849.tre"... 2016-03-28 20:09:11,394 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_581@tree859.tre"... 2016-03-28 20:09:11,400 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_582@tree862.tre"... 2016-03-28 20:09:11,429 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_598@tree926.tre"... 2016-03-28 20:09:11,431 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_599@tree927.tre"... 2016-03-28 20:09:11,432 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_603@tree940.tre"... 2016-03-28 20:09:11,435 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_721@tree1298.tre"... 2016-03-28 20:09:11,438 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_723@tree1300.tre"... 2016-03-28 20:09:11,439 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_921@tree4103.tre"... 2016-03-28 20:09:11,439 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_61@tree816.tre"... 2016-03-28 20:09:11,444 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_573@tree839.tre"... 2016-03-28 20:09:11,444 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_566@tree832.tre"... 2016-03-28 20:09:11,444 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1522@tree3044.tre"... 2016-03-28 20:09:11,445 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1570@tree3142.tre"... 2016-03-28 20:09:11,445 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1583@tree3194.tre"... 2016-03-28 20:09:11,445 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1572@tree3145.tre"... 2016-03-28 20:09:11,445 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2909@tree6735.tre"... 2016-03-28 20:09:11,446 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_43@tree3862.tre"... 2016-03-28 20:09:11,446 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_38@tree1750.tre"... 2016-03-28 20:09:11,447 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2878@tree6673.tre"... 2016-03-28 20:09:11,447 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2624@tree6139.tre"... 2016-03-28 20:09:11,453 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2128@tree4437.tre"... 2016-03-28 20:09:11,453 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1102@tree2177.tre"... 2016-03-28 20:09:11,454 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1129@tree2251.tre"... 2016-03-28 20:09:11,454 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1109@tree2201.tre"... 2016-03-28 20:09:11,456 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2004@tree4118.tre"... 2016-03-28 20:09:11,458 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_53@tree1280.tre"... 2016-03-28 20:09:11,459 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1118@tree2226.tre"... 2016-03-28 20:09:11,466 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2669@tree6213.tre"... 2016-03-28 20:09:11,494 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2032@tree5922.tre"... 2016-03-28 20:09:11,496 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1901@tree3877.tre"... 2016-03-28 20:09:11,498 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_713@tree1287.tre"... 2016-03-28 20:09:11,506 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2912@tree6740.tre"... 2016-03-28 20:09:11,510 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_259@tree142.tre"... 2016-03-28 20:09:11,510 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_264@tree150.tre"... 2016-03-28 20:09:11,512 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_267@tree161.tre"... 2016-03-28 20:09:11,512 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2077@tree4291.tre"... 2016-03-28 20:09:11,512 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_293@tree201.tre"... 2016-03-28 20:09:11,535 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_197@tree784.tre"... 2016-03-28 20:09:11,536 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_595@tree896.tre"... 2016-03-28 20:09:11,540 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_131@tree6236.tre"... 2016-03-28 20:09:11,566 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2689@tree6241.tre"... 2016-03-28 20:09:11,576 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_597@tree906.tre"... 2016-03-28 20:09:11,576 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2001@tree4100.tre"... 2016-03-28 20:09:11,597 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_606@tree5290.tre"... 2016-03-28 20:09:11,601 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_270@tree159.tre"... 2016-03-28 20:09:11,650 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_596@tree901.tre"... 2016-03-28 20:09:11,651 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_294@tree202.tre"... 2016-03-28 20:09:11,651 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_292@tree199.tre"... 2016-03-28 20:09:11,652 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_58@tree775.tre"... 2016-03-28 20:09:11,659 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_548@tree798.tre"... 2016-03-28 20:09:11,662 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2055@tree4234.tre"... 2016-03-28 20:09:11,662 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2057@tree4240.tre"... 2016-03-28 20:09:11,706 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2127@tree4426.tre"... 2016-03-28 20:09:11,706 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_594@tree890.tre"... 2016-03-28 20:09:11,709 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_261@tree145.tre"... 2016-03-28 20:09:11,712 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_57@tree777.tre"... 2016-03-28 20:09:11,736 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1087@tree2114.tre"... 2016-03-28 20:09:11,739 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1087@tree2115.tre"... 2016-03-28 20:09:11,741 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2690@tree6243.tre"... 2016-03-28 20:09:11,817 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2045@tree4213.tre"... 2016-03-28 20:09:11,960 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_605@tree947.tre"... 2016-03-28 20:09:11,960 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_271@tree5017.tre"... 2016-03-28 20:09:11,964 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2661@tree6198.tre"... 2016-03-28 20:09:11,978 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2052@tree4228.tre"... 2016-03-28 20:09:11,978 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1103@tree2178.tre"... 2016-03-28 20:09:11,981 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_14@tree12.tre"... 2016-03-28 20:09:11,987 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2598@tree6020.tre"... 2016-03-28 20:09:12,005 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2000@tree4098.tre"... 2016-03-28 20:09:12,006 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_20@tree2162.tre"... 2016-03-28 20:09:12,011 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1101@tree2172.tre"... 2016-03-28 20:09:12,021 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2565@tree5708.tre"... 2016-03-28 20:09:12,022 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1094@tree2138.tre"... 2016-03-28 20:09:12,022 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2641@tree6160.tre"... 2016-03-28 20:09:12,038 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_99@tree5885.tre"... 2016-03-28 20:09:12,040 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_93@tree1411.tre"... 2016-03-28 20:09:12,042 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_898@tree1732.tre"... 2016-03-28 20:09:12,044 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_216@tree5865.tre"... 2016-03-28 20:09:12,044 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_901@tree1740.tre"... 2016-03-28 20:09:12,044 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2830@tree6583.tre"... 2016-03-28 20:09:12,044 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2831@tree6584.tre"... 2016-03-28 20:09:12,045 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_719@tree1296.tre"... 2016-03-28 20:09:12,045 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1975@tree4041.tre"... 2016-03-28 20:09:12,052 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1821@tree3678.tre"... 2016-03-28 20:09:12,054 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1581@tree3188.tre"... 2016-03-28 20:09:12,054 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1575@tree3164.tre"... 2016-03-28 20:09:12,055 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1573@tree3144.tre"... 2016-03-28 20:09:12,055 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_934@tree1832.tre"... 2016-03-28 20:09:12,055 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_200@tree6585.tre"... 2016-03-28 20:09:12,056 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_152@tree5743.tre"... 2016-03-28 20:09:12,056 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_53@tree1281.tre"... 2016-03-28 20:09:12,057 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2076@tree4282.tre"... 2016-03-28 20:09:12,057 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_50@tree1397.tre"... 2016-03-28 20:09:12,057 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_80@tree5881.tre"... 2016-03-28 20:09:12,062 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_424@tree532.tre"... 2016-03-28 20:09:12,062 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_82@tree5792.tre"... 2016-03-28 20:09:12,064 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1962@tree6580.tre"... 2016-03-28 20:09:12,068 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_915@tree1802.tre"... 2016-03-28 20:09:12,070 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_32@tree1775.tre"... 2016-03-28 20:09:12,074 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_915@tree1803.tre"... 2016-03-28 20:09:12,081 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2625@tree6140.tre"... 2016-03-28 20:09:12,082 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1130@tree2258.tre"... 2016-03-28 20:09:12,084 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2047@tree4217.tre"... 2016-03-28 20:09:12,084 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_386@tree459.tre"... 2016-03-28 20:09:12,085 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_139@tree5860.tre"... 2016-03-28 20:09:12,086 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_126@tree2233.tre"... 2016-03-28 20:09:12,094 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_136@tree5857.tre"... 2016-03-28 20:09:12,094 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1944@tree3959.tre"... 2016-03-28 20:09:12,258 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2828@tree6578.tre"... 2016-03-28 20:09:12,263 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_142@tree38.tre"... 2016-03-28 20:09:12,270 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_21@tree37.tre"... 2016-03-28 20:09:12,290 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_75@tree1743.tre"... 2016-03-28 20:09:12,296 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_41@tree1396.tre"... 2016-03-28 20:09:12,298 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2044@tree4212.tre"... 2016-03-28 20:09:12,310 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1916@tree3902.tre"... 2016-03-28 20:09:12,328 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_926@tree1825.tre"... 2016-03-28 20:09:12,331 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1133@tree5647.tre"... 2016-03-28 20:09:12,332 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_625@tree1016.tre"... 2016-03-28 20:09:12,332 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1842@tree3724.tre"... 2016-03-28 20:09:12,343 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_288@tree5028.tre"... 2016-03-28 20:09:12,346 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_385@tree458.tre"... 2016-03-28 20:09:12,349 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1843@tree3725.tre"... 2016-03-28 20:09:12,352 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1858@tree3754.tre"... 2016-03-28 20:09:12,368 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_394@tree483.tre"... 2016-03-28 20:09:12,369 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_52@tree463.tre"... 2016-03-28 20:09:12,370 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2712@tree6296.tre"... 2016-03-28 20:09:12,435 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2610@tree6117.tre"... 2016-03-28 20:09:12,481 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_650@tree1147.tre"... 2016-03-28 20:09:12,481 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_275@tree167.tre"... 2016-03-28 20:09:12,491 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_37@tree5871.tre"... 2016-03-28 20:09:12,491 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_73@tree5787.tre"... 2016-03-28 20:09:12,493 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_88@tree5848.tre"... 2016-03-28 20:09:12,494 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_72@tree801.tre"... 2016-03-28 20:09:12,549 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_283@tree184.tre"... 2016-03-28 20:09:12,550 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_30@tree2281.tre"... 2016-03-28 20:09:12,550 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1443@tree2917.tre"... 2016-03-28 20:09:12,551 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2140@tree4483.tre"... 2016-03-28 20:09:12,555 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2820@tree6566.tre"... 2016-03-28 20:09:12,671 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1483@tree2983.tre"... 2016-03-28 20:09:12,672 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1478@tree2974.tre"... 2016-03-28 20:09:12,672 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1474@tree2969.tre"... 2016-03-28 20:09:12,673 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1473@tree2967.tre"... 2016-03-28 20:09:12,673 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1453@tree2932.tre"... 2016-03-28 20:09:12,674 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1450@tree2926.tre"... 2016-03-28 20:09:12,675 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1384@tree2766.tre"... 2016-03-28 20:09:12,675 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1382@tree2763.tre"... 2016-03-28 20:09:12,675 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1318@tree2634.tre"... 2016-03-28 20:09:12,681 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1312@tree2628.tre"... 2016-03-28 20:09:12,683 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2165@tree4564.tre"... 2016-03-28 20:09:12,685 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1518@tree6333.tre"... 2016-03-28 20:09:12,685 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2898@tree6713.tre"... 2016-03-28 20:09:12,685 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2896@tree6709.tre"... 2016-03-28 20:09:12,687 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1264@tree2544.tre"... 2016-03-28 20:09:12,687 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_56@tree5821.tre"... 2016-03-28 20:09:12,687 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2648@tree6171.tre"... 2016-03-28 20:09:12,689 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2564@tree5699.tre"... 2016-03-28 20:09:12,690 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_81@tree5863.tre"... 2016-03-28 20:09:12,693 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1996@tree4089.tre"... 2016-03-28 20:09:12,694 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1446@tree2921.tre"... 2016-03-28 20:09:12,695 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2039@tree4198.tre"... 2016-03-28 20:09:12,696 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2042@tree4202.tre"... 2016-03-28 20:09:12,697 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1942@tree3962.tre"... 2016-03-28 20:09:12,697 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1868@tree3767.tre"... 2016-03-28 20:09:12,697 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1567@tree3137.tre"... 2016-03-28 20:09:12,698 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_244@tree3855.tre"... 2016-03-28 20:09:12,698 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2879@tree6674.tre"... 2016-03-28 20:09:12,843 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_412@tree2166.tre"... 2016-03-28 20:09:12,951 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_225@tree5991.tre"... 2016-03-28 20:09:13,260 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1867@tree3766.tre"... 2016-03-28 20:09:13,275 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1278@tree2572.tre"... 2016-03-28 20:09:13,287 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1268@tree2560.tre"... 2016-03-28 20:09:13,289 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_787@tree1489.tre"... 2016-03-28 20:09:13,291 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2046@tree5928.tre"... 2016-03-28 20:09:13,291 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_119@tree1.tre"... 2016-03-28 20:09:13,292 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_118@tree1.tre"... 2016-03-28 20:09:13,292 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2577@tree5980.tre"... 2016-03-28 20:09:13,297 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2866@tree6656.tre"... 2016-03-28 20:09:13,304 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2860@tree6646.tre"... 2016-03-28 20:09:13,310 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_116@tree1.tre"... 2016-03-28 20:09:13,316 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_121@tree7.tre"... 2016-03-28 20:09:13,326 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2876@tree6670.tre"... 2016-03-28 20:09:13,327 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2926@tree6757.tre"... 2016-03-28 20:09:13,327 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1764@tree6299.tre"... 2016-03-28 20:09:13,327 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_137@tree1.tre"... 2016-03-28 20:09:13,328 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_140@tree1.tre"... 2016-03-28 20:09:13,328 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2798@tree6497.tre"... 2016-03-28 20:09:13,328 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_104@tree1.tre"... 2016-03-28 20:09:13,328 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_142@tree1.tre"... 2016-03-28 20:09:13,329 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_138@tree1.tre"... 2016-03-28 20:09:13,329 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2864@tree6651.tre"... 2016-03-28 20:09:13,329 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_139@tree1.tre"... 2016-03-28 20:09:13,329 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1872@tree3780.tre"... 2016-03-28 20:09:13,330 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_125@tree1.tre"... 2016-03-28 20:09:13,330 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2869@tree6661.tre"... 2016-03-28 20:09:13,332 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_112@tree1.tre"... 2016-03-28 20:09:13,333 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2853@tree6624.tre"... 2016-03-28 20:09:13,377 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_123@tree1.tre"... 2016-03-28 20:09:13,377 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2872@tree6665.tre"... 2016-03-28 20:09:13,379 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_122@tree1.tre"... 2016-03-28 20:09:13,379 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_124@tree1.tre"... 2016-03-28 20:09:13,380 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_129@tree1.tre"... 2016-03-28 20:09:13,380 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_147@tree1.tre"... 2016-03-28 20:09:13,381 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_148@tree1.tre"... 2016-03-28 20:09:13,381 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_149@tree4.tre"... 2016-03-28 20:09:13,381 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_150@tree3.tre"... 2016-03-28 20:09:13,382 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_156@tree1.tre"... 2016-03-28 20:09:13,386 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_153@tree1.tre"... 2016-03-28 20:09:13,387 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_151@tree1.tre"... 2016-03-28 20:09:13,387 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_154@tree1.tre"... 2016-03-28 20:09:13,387 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_155@tree1.tre"... 2016-03-28 20:09:13,387 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_152@tree1.tre"... 2016-03-28 20:09:13,388 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_157@tree1.tre"... 2016-03-28 20:09:13,388 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_158@tree1.tre"... 2016-03-28 20:09:13,388 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_159@tree1.tre"... 2016-03-28 20:09:13,389 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_144@tree1.tre"... 2016-03-28 20:09:13,390 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_136@tree1.tre"... 2016-03-28 20:09:13,390 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2857@tree6628.tre"... 2016-03-28 20:09:13,390 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1887@tree6629.tre"... 2016-03-28 20:09:13,393 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2850@tree6620.tre"... 2016-03-28 20:09:13,395 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2444@tree6526.tre"... 2016-03-28 20:09:13,396 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2870@tree6662.tre"... 2016-03-28 20:09:13,397 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2871@tree6663.tre"... 2016-03-28 20:09:13,397 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_166@tree1.tre"... 2016-03-28 20:09:13,399 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_161@tree1.tre"... 2016-03-28 20:09:13,401 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_160@tree1.tre"... 2016-03-28 20:09:13,401 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1979@tree6300.tre"... 2016-03-28 20:09:13,404 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2805@tree6512.tre"... 2016-03-28 20:09:13,407 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_162@tree1.tre"... 2016-03-28 20:09:13,408 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_164@tree1.tre"... 2016-03-28 20:09:13,408 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_165@tree1.tre"... 2016-03-28 20:09:13,408 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_167@tree1.tre"... 2016-03-28 20:09:13,408 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_102@tree1.tre"... 2016-03-28 20:09:13,408 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_174@tree1.tre"... 2016-03-28 20:09:13,409 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_110@tree1.tre"... 2016-03-28 20:09:13,409 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2845@tree6606.tre"... 2016-03-28 20:09:13,410 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_172@tree1.tre"... 2016-03-28 20:09:13,410 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2454@tree5247.tre"... 2016-03-28 20:09:13,411 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_172@tree2.tre"... 2016-03-28 20:09:13,411 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_173@tree1.tre"... 2016-03-28 20:09:13,411 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2600@tree6022.tre"... 2016-03-28 20:09:13,414 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_177@tree1.tre"... 2016-03-28 20:09:13,414 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_178@tree1.tre"... 2016-03-28 20:09:13,417 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2591@tree6024.tre"... 2016-03-28 20:09:13,425 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2599@tree6021.tre"... 2016-03-28 20:09:13,429 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1966@tree4019.tre"... 2016-03-28 20:09:13,429 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2875@tree6668.tre"... 2016-03-28 20:09:13,430 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2707@tree6281.tre"... 2016-03-28 20:09:13,437 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2404@tree5068.tre"... 2016-03-28 20:09:13,450 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_420@tree522.tre"... 2016-03-28 20:09:13,594 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2861@tree6647.tre"... 2016-03-28 20:09:13,594 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2859@tree6643.tre"... 2016-03-28 20:09:13,656 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1797@tree3635.tre"... 2016-03-28 20:09:13,656 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2844@tree6605.tre"... 2016-03-28 20:09:13,656 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2843@tree6604.tre"... 2016-03-28 20:09:13,657 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2825@tree6572.tre"... 2016-03-28 20:09:13,657 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2695@tree6250.tre"... 2016-03-28 20:09:13,657 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2656@tree6185.tre"... 2016-03-28 20:09:13,714 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1600@tree3231.tre"... 2016-03-28 20:09:13,730 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2688@tree6240.tre"... 2016-03-28 20:09:15,800 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2359@tree4962.tre"... 2016-03-28 20:09:15,801 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2687@tree6239.tre"... 2016-03-28 20:09:15,801 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2691@tree6244.tre"... 2016-03-28 20:09:15,801 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2685@tree6235.tre"... 2016-03-28 20:09:15,803 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_168@tree1.tre"... 2016-03-28 20:09:15,804 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1634@tree3303.tre"... 2016-03-28 20:09:15,987 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1927@tree6215.tre"... 2016-03-28 20:09:15,991 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2587@tree5998.tre"... 2016-03-28 20:09:15,995 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1981@tree4052.tre"... 2016-03-28 20:09:15,996 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2684@tree6644.tre"... 2016-03-28 20:09:15,996 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1428@tree2855.tre"... 2016-03-28 20:09:16,113 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1646@tree6231.tre"... 2016-03-28 20:09:16,114 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2833@tree6588.tre"... 2016-03-28 20:09:16,146 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2834@tree6589.tre"... 2016-03-28 20:09:16,148 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2816@tree6556.tre"... 2016-03-28 20:09:16,151 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2741@tree6645.tre"... 2016-03-28 20:09:16,161 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2589@tree6001.tre"... 2016-03-28 20:09:16,185 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2655@tree6181.tre"... 2016-03-28 20:09:16,190 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1997@tree6183.tre"... 2016-03-28 20:09:16,214 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2654@tree6179.tre"... 2016-03-28 20:09:16,215 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2585@tree5994.tre"... 2016-03-28 20:09:16,216 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2653@tree6178.tre"... 2016-03-28 20:09:16,223 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2657@tree6191.tre"... 2016-03-28 20:09:16,227 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2551@tree6180.tre"... 2016-03-28 20:09:16,244 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2576@tree5975.tre"... 2016-03-28 20:09:16,427 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1870@tree3769.tre"... 2016-03-28 20:09:16,447 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2659@tree6195.tre"... 2016-03-28 20:09:16,450 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_181@tree2.tre"... 2016-03-28 20:09:16,471 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2881@tree6680.tre"... 2016-03-28 20:09:16,476 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2143@tree4505.tre"... 2016-03-28 20:09:16,476 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2098@tree6487.tre"... 2016-03-28 20:09:16,477 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2851@tree6621.tre"... 2016-03-28 20:09:16,478 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2415@tree5096.tre"... 2016-03-28 20:09:16,499 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_423@tree2857.tre"... 2016-03-28 20:09:20,797 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2573@tree5959.tre"... 2016-03-28 20:09:20,798 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2711@tree6295.tre"... 2016-03-28 20:09:20,804 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2460@tree5285.tre"... 2016-03-28 20:09:29,476 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1252@tree2661.tre"... 2016-03-28 20:09:29,478 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1336@tree2660.tre"... 2016-03-28 20:09:29,479 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1948@tree6513.tre"... 2016-03-28 20:09:29,481 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1796@tree6514.tre"... 2016-03-28 20:09:29,481 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2243@tree6515.tre"... 2016-03-28 20:09:29,482 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2670@tree6214.tre"... 2016-03-28 20:09:29,484 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2671@tree6216.tre"... 2016-03-28 20:09:29,484 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2673@tree6219.tre"... 2016-03-28 20:09:29,486 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2674@tree6220.tre"... 2016-03-28 20:09:29,487 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2675@tree6221.tre"... 2016-03-28 20:09:29,490 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2676@tree6222.tre"... 2016-03-28 20:09:29,492 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2677@tree6223.tre"... 2016-03-28 20:09:29,500 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2682@tree6227.tre"... 2016-03-28 20:09:29,502 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2683@tree6228.tre"... 2016-03-28 20:09:29,502 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2807@tree6519.tre"... 2016-03-28 20:09:29,503 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2808@tree6522.tre"... 2016-03-28 20:09:29,503 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2667@tree6211.tre"... 2016-03-28 20:09:29,503 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2838@tree6594.tre"... 2016-03-28 20:09:29,517 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2087@tree4323.tre"... 2016-03-28 20:09:29,517 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1988@tree4074.tre"... 2016-03-28 20:09:29,559 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2593@tree6247.tre"... 2016-03-28 20:09:29,559 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2614@tree6121.tre"... 2016-03-28 20:09:29,561 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2628@tree6143.tre"... 2016-03-28 20:09:29,563 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2323@tree6537.tre"... 2016-03-28 20:09:29,564 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1940@tree3943.tre"... 2016-03-28 20:09:29,583 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_437@tree6242.tre"... 2016-03-28 20:09:29,608 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2594@tree6014.tre"... 2016-03-28 20:09:29,612 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2357@tree6538.tre"... 2016-03-28 20:09:29,612 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_251@tree134.tre"... 2016-03-28 20:09:29,624 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1849@tree3731.tre"... 2016-03-28 20:09:29,640 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2811@tree6533.tre"... 2016-03-28 20:09:29,641 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2604@tree6043.tre"... 2016-03-28 20:09:30,732 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1563@tree6170.tre"... 2016-03-28 20:09:30,739 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2664@tree6201.tre"... 2016-03-28 20:09:30,849 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1776@tree3581.tre"... 2016-03-28 20:09:30,864 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_185@tree1.tre"... 2016-03-28 20:09:30,867 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1337@tree6167.tre"... 2016-03-28 20:09:30,868 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2629@tree6162.tre"... 2016-03-28 20:09:30,871 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2156@tree5953.tre"... 2016-03-28 20:09:30,871 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1338@tree2666.tre"... 2016-03-28 20:09:30,872 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2422@tree5117.tre"... 2016-03-28 20:09:30,872 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_182@tree1.tre"... 2016-03-28 20:09:30,874 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_183@tree2.tre"... 2016-03-28 20:09:30,876 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2061@tree4245.tre"... 2016-03-28 20:09:30,876 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2068@tree6488.tre"... 2016-03-28 20:09:30,877 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2405@tree6669.tre"... 2016-03-28 20:09:30,877 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1366@tree6166.tre"... 2016-03-28 20:09:30,878 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2092@tree4335.tre"... 2016-03-28 20:09:30,878 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2544@tree6482.tre"... 2016-03-28 20:09:30,879 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2696@tree6249.tre"... 2016-03-28 20:09:30,882 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2709@tree6290.tre"... 2016-03-28 20:09:31,015 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2842@tree6603.tre"... 2016-03-28 20:09:31,018 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2708@tree6289.tre"... 2016-03-28 20:09:31,021 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1343@tree6255.tre"... 2016-03-28 20:09:31,022 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1788@tree6534.tre"... 2016-03-28 20:09:31,023 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1786@tree6257.tre"... 2016-03-28 20:09:31,028 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2678@tree6224.tre"... 2016-03-28 20:09:31,031 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_421@tree523.tre"... 2016-03-28 20:09:31,032 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_1761@tree6151.tre"... 2016-03-28 20:09:31,185 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2710@tree6291.tre"... 2016-03-28 20:09:31,189 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_335@tree360.tre"... 2016-03-28 20:09:31,189 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_338@tree5527.tre"... 2016-03-28 20:09:31,189 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_339@tree365.tre"... 2016-03-28 20:09:31,190 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_340@tree5532.tre"... 2016-03-28 20:09:31,191 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_343@tree5534.tre"... 2016-03-28 20:09:31,191 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_348@tree381.tre"... 2016-03-28 20:09:31,191 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_349@tree5539.tre"... 2016-03-28 20:09:31,191 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_353@tree5542.tre"... 2016-03-28 20:09:31,192 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_358@tree406.tre"... 2016-03-28 20:09:31,192 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_361@tree5551.tre"... 2016-03-28 20:09:31,192 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_366@tree5552.tre"... 2016-03-28 20:09:31,192 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_367@tree418.tre"... 2016-03-28 20:09:31,192 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_368@tree5553.tre"... 2016-03-28 20:09:31,193 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_369@tree5554.tre"... 2016-03-28 20:09:31,193 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_370@tree426.tre"... 2016-03-28 20:09:31,194 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_372@tree431.tre"... 2016-03-28 20:09:31,194 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_373@tree432.tre"... 2016-03-28 20:09:31,195 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_374@tree433.tre"... 2016-03-28 20:09:31,196 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_375@tree436.tre"... 2016-03-28 20:09:31,196 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_376@tree438.tre"... 2016-03-28 20:09:31,196 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_380@tree5560.tre"... 2016-03-28 20:09:31,196 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_382@tree449.tre"... 2016-03-28 20:09:31,197 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_387@tree5562.tre"... 2016-03-28 20:09:31,197 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_388@tree469.tre"... 2016-03-28 20:09:31,197 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_389@tree470.tre"... 2016-03-28 20:09:31,197 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_393@tree482.tre"... 2016-03-28 20:09:31,197 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_397@tree494.tre"... 2016-03-28 20:09:31,197 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_399@tree5565.tre"... 2016-03-28 20:09:31,198 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_400@tree497.tre"... 2016-03-28 20:09:31,198 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_402@tree5570.tre"... 2016-03-28 20:09:31,198 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_403@tree503.tre"... 2016-03-28 20:09:31,198 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_404@tree506.tre"... 2016-03-28 20:09:31,198 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_405@tree507.tre"... 2016-03-28 20:09:31,199 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_407@tree513.tre"... 2016-03-28 20:09:31,199 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_408@tree5571.tre"... 2016-03-28 20:09:31,199 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_411@tree518.tre"... 2016-03-28 20:09:31,199 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_414@tree519.tre"... 2016-03-28 20:09:31,199 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_415@tree5572.tre"... 2016-03-28 20:09:31,199 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_430@tree541.tre"... 2016-03-28 20:09:31,200 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_441@tree5575.tre"... 2016-03-28 20:09:31,200 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_444@tree564.tre"... 2016-03-28 20:09:31,200 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_446@tree565.tre"... 2016-03-28 20:09:31,200 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_447@tree5576.tre"... 2016-03-28 20:09:31,200 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_448@tree5577.tre"... 2016-03-28 20:09:31,200 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_449@tree570.tre"... 2016-03-28 20:09:31,200 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_450@tree574.tre"... 2016-03-28 20:09:31,201 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_443@tree562.tre"... 2016-03-28 20:09:31,202 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_463@tree604.tre"... 2016-03-28 20:09:31,202 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_470@tree615.tre"... 2016-03-28 20:09:31,202 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_471@tree617.tre"... 2016-03-28 20:09:31,202 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_473@tree623.tre"... 2016-03-28 20:09:31,203 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_474@tree627.tre"... 2016-03-28 20:09:31,203 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_475@tree5594.tre"... 2016-03-28 20:09:31,203 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_477@tree633.tre"... 2016-03-28 20:09:31,203 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_479@tree636.tre"... 2016-03-28 20:09:31,203 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_480@tree637.tre"... 2016-03-28 20:09:31,203 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_481@tree644.tre"... 2016-03-28 20:09:31,203 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_482@tree5595.tre"... 2016-03-28 20:09:31,204 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_483@tree647.tre"... 2016-03-28 20:09:31,204 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_485@tree651.tre"... 2016-03-28 20:09:31,204 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2448@tree5223.tre"... 2016-03-28 20:09:33,038 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2739@tree6601.tre"... 2016-03-28 20:09:33,502 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2554@tree5580.tre"... 2016-03-28 20:09:33,505 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2715@tree6308.tre"... 2016-03-28 20:09:33,506 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2753@tree6360.tre"... 2016-03-28 20:09:33,507 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_263@tree149.tre"... 2016-03-28 20:09:33,508 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2542@tree5590.tre"... 2016-03-28 20:09:37,512 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2737@tree6322.tre"... 2016-03-28 20:09:37,514 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2738@tree6323.tre"... 2016-03-28 20:09:37,517 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2738@tree6324.tre"... 2016-03-28 20:09:37,518 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2892@tree6700.tre"... 2016-03-28 20:09:37,525 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2891@tree6699.tre"... 2016-03-28 20:09:37,527 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_106@tree1.tre"... 2016-03-28 20:09:37,528 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2731@tree6428.tre"... 2016-03-28 20:09:37,529 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2713@tree6309.tre"... 2016-03-28 20:09:37,531 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2742@tree6342.tre"... 2016-03-28 20:09:37,532 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2757@tree6369.tre"... 2016-03-28 20:09:37,624 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2553@tree5579.tre"... 2016-03-28 20:09:37,625 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2556@tree5586.tre"... 2016-03-28 20:09:37,626 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_312@tree264.tre"... 2016-03-28 20:09:37,627 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_313@tree6681.tre"... 2016-03-28 20:09:37,629 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2484@tree6607.tre"... 2016-03-28 20:09:37,634 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2849@tree6615.tre"... 2016-03-28 20:09:37,635 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2822@tree6569.tre"... 2016-03-28 20:09:37,643 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_645@tree1.tre"... 2016-03-28 20:09:37,643 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_651@tree2.tre"... 2016-03-28 20:09:37,643 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2919@tree6749.tre"... 2016-03-28 20:09:37,644 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_619@tree8.tre"... 2016-03-28 20:09:37,644 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_75@tree1.tre"... 2016-03-28 20:09:37,644 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_98@tree1.tre"... 2016-03-28 20:09:37,644 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_632@tree2.tre"... 2016-03-28 20:09:37,644 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_620@tree1.tre"... 2016-03-28 20:09:37,644 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_163@tree1.tre"... 2016-03-28 20:09:37,645 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_644@tree1.tre"... 2016-03-28 20:09:37,645 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_640@tree1.tre"... 2016-03-28 20:09:37,646 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_643@tree1.tre"... 2016-03-28 20:09:37,647 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2921@tree6749.tre"... 2016-03-28 20:09:37,647 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2923@tree6751.tre"... 2016-03-28 20:09:37,654 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_646@tree1.tre"... 2016-03-28 20:09:37,654 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_71@tree1.tre"... 2016-03-28 20:09:37,654 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2922@tree6752.tre"... 2016-03-28 20:09:37,654 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_652@tree4.tre"... 2016-03-28 20:09:37,654 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_639@tree1.tre"... 2016-03-28 20:09:37,655 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_74@tree1.tre"... 2016-03-28 20:09:37,655 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_615@Tr76459.tre"... 2016-03-28 20:09:37,672 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_634@tree1.tre"... 2016-03-28 20:09:37,678 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_618@tree1.tre"... 2016-03-28 20:09:37,683 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2917@tree6745.tre"... 2016-03-28 20:09:37,686 INFO [default] reading "../opentree5.0/exemplified_phylo/pg_2918@tree6755.tre"... 2016-03-28 20:09:37,687 INFO [default] reading "../opentree5.0/exemplified_phylo/ot_656@tree2.tre"...