./bin/shard_shas.sh > /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/.tmp_git_shas.txt if ! diff /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/git_shas.txt /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/.tmp_git_shas.txt >/dev/null 2>&1 ; then mv /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/.tmp_git_shas.txt /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/git_shas.txt ; else rm /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/.tmp_git_shas.txt ; fi bin/config_checker.py synthesis.collections /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/config > /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/.raw_collections.txt if ! diff \ /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/collections.txt \ /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/.raw_collections.txt 2>/dev/null ; \ then \ mv /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/.raw_collections.txt \ /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/collections.txt ; \ else rm /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/.raw_collections.txt ; \ fi bin/reaggregate-synth-collections.sh /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/.raw_rank_collection.json /home/bredelings/Devel/OpenTree/peyotl/scripts/concatenate_collections.py /home/bredelings/Devel/OpenTree/collections/shards/collections-1/collections-by-owner//pcart/cnidaria.json /home/bredelings/Devel/OpenTree/collections/shards/collections-1/collections-by-owner//mwestneat/reef-fishes.json /home/bredelings/Devel/OpenTree/collections/shards/collections-1/collections-by-owner//josephwb/hypocreales.json /home/bredelings/Devel/OpenTree/collections/shards/collections-1/collections-by-owner//kcranston/barnacles.json /home/bredelings/Devel/OpenTree/collections/shards/collections-1/collections-by-owner//opentreeoflife/plants.json /home/bredelings/Devel/OpenTree/collections/shards/collections-1/collections-by-owner//josephwb/aves.json /home/bredelings/Devel/OpenTree/collections/shards/collections-1/collections-by-owner//opentreeoflife/metazoa.json /home/bredelings/Devel/OpenTree/collections/shards/collections-1/collections-by-owner//opentreeoflife/fungi.json /home/bredelings/Devel/OpenTree/collections/shards/collections-1/collections-by-owner//opentreeoflife/safe-microbes.json /home/bredelings/Devel/OpenTree/collections/shards/collections-1/collections-by-owner//opentreeoflife/default.json --output=/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/.raw_rank_collection.json if ! diff \ /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/rank_collection.json \ /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/.raw_rank_collection.json \ 2>/dev/null ; \ then \ mv /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/.raw_rank_collection.json \ /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/rank_collection.json ; \ else \ rm /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/.raw_rank_collection.json ; \ fi /home/bredelings/Devel/OpenTree/peyotl/scripts/phylesystem/export_studies_from_collection.py \ --phylesystem-par=/home/bredelings/Devel/OpenTree/phylesystem/shards \ --output-dir=/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot \ /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/rank_collection.json \ -v 2>&1 | tee /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/stdouterr.txt "NONE" is an invalid formatter name Config file "/home/bredelings/.peyotl/config" does not contain option "repo_nexml2json"" in section "phylesystem" Config file "/home/bredelings/.peyotl/config" does not contain option "max_file_size"" in section "phylesystem" export_studies_from_collection.py: /home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_45/pg_2045/pg_2045.json does not exist: removing from collection on the assumption that the study has been deleted. export_studies_from_collection.py: /home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_02/ot_1202/ot_1202.json does not exist: removing from collection on the assumption that the study has been deleted. export_studies_from_collection.py: /home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_61/ot_1261/ot_1261.json does not exist: removing from collection on the assumption that the study has been deleted. export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_95/ot_895/ot_895.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_895@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_95/ot_895/ot_895.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_895@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_19/ot_519/ot_519.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_519@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_19/ot_519/ot_519.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_519@Tr88326.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_96/ot_896/ot_896.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_896@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_51/pg_1951/pg_1951.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1951@tree3975.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_30/ot_930/ot_930.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_930@tree3.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_51/pg_1951/pg_1951.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1951@tree3974.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_32/ot_932/ot_932.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_932@tree6.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_42/ot_942/ot_942.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_942@Tr94692.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_29/ot_929/ot_929.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_929@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_86/pg_1786/pg_1786.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1786@tree6257.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_24/ot_924/ot_924.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_924@Tr97534.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_61/pg_1761/pg_1761.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1761@tree6151.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_45/pg_2445/pg_2445.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2445@tree5206.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_38/ot_938/ot_938.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_938@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_85/pg_1785/pg_1785.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1785@tree6248.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_14/ot_714/ot_714.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_714@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_44/ot_944/ot_944.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_944@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_88/pg_1788/pg_1788.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1788@tree6534.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_57/ot_957/ot_957.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_957@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_29/ot_729/ot_729.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_729@Tr90969.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_49/ot_949/ot_949.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_949@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_33/ot_933/ot_933.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_933@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_47/ot_947/ot_947.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_947@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_54/ot_954/ot_954.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_954@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_47/ot_947/ot_947.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_947@tree3.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_81/ot_981/ot_981.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_981@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_47/ot_947/ot_947.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_947@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_47/pg_1947/pg_1947.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1947@tree3965.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_25/ot_925/ot_925.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_925@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_60/ot_960/ot_960.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_960@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_56/ot_956/ot_956.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_956@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_00/ot_900/ot_900.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_900@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_84/ot_984/ot_984.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_984@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_85/ot_985/ot_985.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_985@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_83/ot_983/ot_983.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_983@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_98/ot_898/ot_898.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_898@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_98/ot_898/ot_898.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_898@tree3.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_98/ot_898/ot_898.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_898@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_82/ot_982/ot_982.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_982@tree4.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_89/ot_989/ot_989.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_989@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_90/ot_990/ot_990.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_990@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_64/ot_964/ot_964.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_964@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_65/ot_965/ot_965.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_965@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_23/ot_523/ot_523.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_523@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_71/ot_771/ot_771.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_771@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_48/ot_948/ot_948.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_948@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_51/ot_951/ot_951.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_951@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_35/ot_935/ot_935.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_935@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_34/ot_934/ot_934.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_934@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_13/ot_613/ot_613.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_613@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_55/ot_955/ot_955.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_955@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_52/ot_952/ot_952.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_952@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_87/ot_987/ot_987.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_987@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_88/ot_988/ot_988.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_988@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_51/pg_2651/pg_2651.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2651@tree6177.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_78/ot_1078/ot_1078.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1078@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_91/ot_1091/ot_1091.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1091@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_93/pg_793/pg_793.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_793@tree5659.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_90/ot_490/ot_490.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_490@Tr70734.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_06/pg_406/pg_406.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_406@tree509.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_01/pg_401/pg_401.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_401@tree5569.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_66/pg_2466/pg_2466.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2466@tree5304.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_97/ot_497/ot_497.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_497@Tr4479.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_32/pg_432/pg_432.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_432@tree546.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_72/ot_372/ot_372.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_372@Tr60567.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_00/pg_300/pg_300.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_300@tree217.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_08/ot_408/ot_408.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_408@Tr65494.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_45/pg_745/pg_745.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_745@tree1360.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_53/pg_1753/pg_1753.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1753@tree3531.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_18/pg_518/pg_518.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_518@tree733.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_31/pg_531/pg_531.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_531@tree763.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_85/pg_485/pg_485.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_485@tree651.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_81/pg_381/pg_381.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_381@tree448.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_93/ot_393/ot_393.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_393@Tr72538.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_86/pg_2486/pg_2486.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2486@tree5347.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_67/ot_467/ot_467.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_467@Tr86931.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_36/ot_436/ot_436.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_436@Tr70613.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_97/pg_2697/pg_2697.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2697@tree6262.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_81/pg_2481/pg_2481.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2481@tree5339.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_74/ot_374/ot_374.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_374@Tr61050.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_35/ot_235/ot_235.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_235@Tr50560.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_67/pg_2467/pg_2467.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2467@tree6025.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_44/ot_344/ot_344.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_344@Tr60495.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_81/ot_381/ot_381.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_381@Tr62023.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_88/pg_1288/pg_1288.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1288@tree2584.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_47/pg_647/pg_647.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_647@tree5621.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_18/pg_1618/pg_1618.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1618@tree5896.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_28/pg_1328/pg_1328.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1328@tree5855.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_80/pg_2280/pg_2280.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2280@tree4827.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_20/pg_1420/pg_1420.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1420@tree5303.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_44/pg_644/pg_644.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_644@tree1127.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_29/pg_529/pg_529.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_529@tree761.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_98/pg_698/pg_698.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_698@tree5648.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_16/pg_516/pg_516.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_516@tree728.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_52/pg_1052/pg_1052.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1052@tree5770.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_08/pg_1608/pg_1608.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1608@tree5892.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_18/pg_2518/pg_2518.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2518@tree5428.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_60/pg_860/pg_860.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_860@tree1654.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_99/pg_699/pg_699.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_699@tree1258.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_76/pg_2276/pg_2276.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2276@tree4823.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_57/pg_857/pg_857.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_857@tree1651.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_87/pg_487/pg_487.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_487@tree5599.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_92/pg_492/pg_492.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_492@tree664.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_32/pg_1032/pg_1032.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1032@tree1981.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_14/pg_2314/pg_2314.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2314@tree4883.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_67/pg_467/pg_467.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_467@tree5592.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_31/pg_1631/pg_1631.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1631@tree3297.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_38/pg_2238/pg_2238.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2238@tree4729.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_40/pg_740/pg_740.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_740@tree1346.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_86/ot_486/ot_486.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_486@Tr2898.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_63/pg_463/pg_463.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_463@tree604.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_68/pg_2468/pg_2468.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2468@tree5310.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_74/pg_674/pg_674.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_674@tree1207.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_43/pg_443/pg_443.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_443@tree562.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_96/pg_2196/pg_2196.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2196@tree4650.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_06/pg_2206/pg_2206.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2206@tree4667.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_76/pg_776/pg_776.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_776@tree5653.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_04/pg_404/pg_404.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_404@tree506.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_15/pg_415/pg_415.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_415@tree5572.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_00/pg_2300/pg_2300.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2300@tree4862.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_04/pg_1604/pg_1604.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1604@tree5891.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_88/pg_388/pg_388.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_388@tree469.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_68/pg_668/pg_668.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_668@tree1193.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_61/pg_361/pg_361.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_361@tree5551.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_63/pg_2263/pg_2263.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2263@tree4797.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_65/pg_1165/pg_1165.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1165@tree2355.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_40/pg_340/pg_340.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_340@tree5532.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_52/pg_352/pg_352.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_352@tree388.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_74/pg_874/pg_874.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_874@tree5717.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_31/pg_2531/pg_2531.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2531@tree5449.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_52/pg_252/pg_252.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_252@tree211.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_33/pg_733/pg_733.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_733@tree1324.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_18/pg_1718/pg_1718.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1718@tree3460.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_19/pg_1719/pg_1719.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1719@tree3462.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_25/pg_525/pg_525.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_525@tree743.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_61/pg_961/pg_961.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_961@tree5754.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_77/pg_1177/pg_1177.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1177@tree5811.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_58/pg_1758/pg_1758.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1758@tree5940.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_90/pg_2290/pg_2290.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2290@tree4850.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_57/pg_1757/pg_1757.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1757@tree3539.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_91/pg_1691/pg_1691.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1691@tree3407.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_27/pg_1727/pg_1727.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1727@tree3475.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_22/pg_2222/pg_2222.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2222@tree4697.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_66/pg_1666/pg_1666.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1666@tree5901.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_69/pg_1669/pg_1669.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1669@tree5902.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_78/pg_1678/pg_1678.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1678@tree3382.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_67/pg_1667/pg_1667.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1667@tree3362.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_09/pg_1609/pg_1609.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1609@tree3245.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_53/ot_353/ot_353.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_353@Tr55240.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_17/pg_1617/pg_1617.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1617@tree3261.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_08/pg_1708/pg_1708.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1708@tree3445.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_83/pg_883/pg_883.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_883@tree1703.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_45/ot_645/ot_645.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_645@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_51/ot_651/ot_651.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_651@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_19/pg_2919/pg_2919.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2919@tree6749.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_19/ot_619/ot_619.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_619@tree8.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_75/ot_75/ot_75.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_75@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_98/ot_98/ot_98.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_98@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_32/ot_632/ot_632.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_632@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_20/ot_620/ot_620.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_620@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_63/ot_163/ot_163.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_163@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_44/ot_644/ot_644.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_644@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_40/ot_640/ot_640.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_640@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_43/ot_643/ot_643.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_643@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_21/pg_2921/pg_2921.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2921@tree6749.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_23/pg_2923/pg_2923.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2923@tree6751.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_46/ot_646/ot_646.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_646@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_71/ot_71/ot_71.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_71@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_22/pg_2922/pg_2922.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2922@tree6752.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_18/ot_618/ot_618.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_618@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_34/ot_634/ot_634.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_634@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_18/pg_2918/pg_2918.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2918@tree6755.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_52/ot_652/ot_652.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_652@tree4.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_74/ot_74/ot_74.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_74@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_39/ot_639/ot_639.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_639@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_15/ot_615/ot_615.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_615@Tr76459.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_17/pg_2917/pg_2917.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2917@tree6745.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_56/ot_656/ot_656.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_656@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_42/pg_2842/pg_2842.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2842@tree6603.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_13/ot_813/ot_813.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_813@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_03/ot_1003/ot_1003.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1003@Tr100305.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_27/pg_2827/pg_2827.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2827@tree6577.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_61/pg_761/pg_761.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_761@tree1415.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_77/pg_77/pg_77.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_77@tree5878.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_54/pg_754/pg_754.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_754@tree1392.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_30/pg_330/pg_330.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_330@tree325.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_31/pg_1131/pg_1131.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1131@tree2265.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_08/pg_2608/pg_2608.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2608@tree6288.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_39/pg_2539/pg_2539.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2539@tree6294.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_45/pg_2645/pg_2645.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2645@tree6165.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_44/pg_2644/pg_2644.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2644@tree6164.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_42/pg_2642/pg_2642.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2642@tree6161.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_26/pg_2626/pg_2626.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2626@tree6142.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_32/pg_332/pg_332.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_332@tree333.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_32/pg_2832/pg_2832.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2832@tree6586.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_66/pg_1866/pg_1866.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1866@tree3765.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_59/pg_59/pg_59.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_59@tree5731.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_04/pg_704/pg_704.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_704@tree1266.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_38/pg_2638/pg_2638.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2638@tree6157.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_74/pg_1974/pg_1974.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1974@tree4038.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_74/pg_1974/pg_1974.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1974@tree4039.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_01/pg_2901/pg_2901.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2901@tree6721.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_06/pg_2906/pg_2906.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2906@tree6730.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_24/pg_1524/pg_1524.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1524@tree3046.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_14/pg_1414/pg_1414.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1414@tree2837.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_11/pg_1411/pg_1411.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1411@tree5110.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_09/pg_1409/pg_1409.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1409@tree2822.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_08/pg_1408/pg_1408.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1408@tree2821.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_07/pg_1407/pg_1407.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1407@tree2818.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_01/pg_1401/pg_1401.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1401@tree2812.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_91/pg_1391/pg_1391.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1391@tree2795.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_34/pg_1434/pg_1434.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1434@tree2876.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_33/pg_2633/pg_2633.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2633@tree6153.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_39/pg_1539/pg_1539.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1539@tree3088.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_34/pg_2634/pg_2634.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2634@tree6154.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_22/pg_1022/pg_1022.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1022@tree1967.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_62/pg_562/pg_562.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_562@tree817.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_88/pg_588/pg_588.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_588@tree878.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_48/pg_2048/pg_2048.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2048@tree4220.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_37/pg_1137/pg_1137.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1137@tree2295.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_62/pg_62/pg_62.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_62@tree2878.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_41/pg_2841/pg_2841.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2841@tree6597.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_85/pg_2085/pg_2085.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2085@tree4317.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_80/pg_180/pg_180.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_180@tree794.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_76/pg_576/pg_576.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_576@tree849.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_81/pg_581/pg_581.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_581@tree859.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_82/pg_582/pg_582.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_582@tree862.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_98/pg_598/pg_598.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_598@tree926.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_99/pg_599/pg_599.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_599@tree927.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_03/pg_603/pg_603.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_603@tree940.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_21/pg_721/pg_721.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_721@tree1298.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_23/pg_723/pg_723.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_723@tree1300.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_21/pg_921/pg_921.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_921@tree4103.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_61/pg_61/pg_61.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_61@tree816.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_73/pg_573/pg_573.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_573@tree839.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_66/pg_566/pg_566.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_566@tree832.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_22/pg_1522/pg_1522.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1522@tree3044.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_70/pg_1570/pg_1570.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1570@tree3142.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_83/pg_1583/pg_1583.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1583@tree3194.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_72/pg_1572/pg_1572.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1572@tree3145.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_09/pg_2909/pg_2909.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2909@tree6735.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_43/pg_43/pg_43.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_43@tree3862.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_38/pg_38/pg_38.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_38@tree1750.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_78/pg_2878/pg_2878.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2878@tree6673.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_24/pg_2624/pg_2624.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2624@tree6139.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_28/pg_2128/pg_2128.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2128@tree4437.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_02/pg_1102/pg_1102.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1102@tree2177.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_29/pg_1129/pg_1129.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1129@tree2251.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_09/pg_1109/pg_1109.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1109@tree2201.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_04/pg_2004/pg_2004.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2004@tree4118.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_53/pg_53/pg_53.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_53@tree1280.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_18/pg_1118/pg_1118.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1118@tree2226.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_69/pg_2669/pg_2669.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2669@tree6213.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_32/pg_2032/pg_2032.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2032@tree5922.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_01/pg_1901/pg_1901.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1901@tree3877.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_13/pg_713/pg_713.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_713@tree1287.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_12/pg_2912/pg_2912.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2912@tree6740.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_59/pg_259/pg_259.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_259@tree142.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_64/pg_264/pg_264.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_264@tree150.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_67/pg_267/pg_267.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_267@tree161.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_77/pg_2077/pg_2077.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2077@tree4291.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_93/pg_293/pg_293.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_293@tree201.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_97/pg_197/pg_197.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_197@tree784.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_95/pg_595/pg_595.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_595@tree896.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_31/pg_131/pg_131.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_131@tree6236.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_89/pg_2689/pg_2689.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2689@tree6241.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_97/pg_597/pg_597.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_597@tree906.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_01/pg_2001/pg_2001.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2001@tree4100.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_06/pg_606/pg_606.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_606@tree5290.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_70/pg_270/pg_270.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_270@tree159.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_96/pg_596/pg_596.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_596@tree901.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_94/pg_294/pg_294.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_294@tree202.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_92/pg_292/pg_292.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_292@tree199.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_58/pg_58/pg_58.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_58@tree775.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_48/pg_548/pg_548.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_548@tree798.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_55/pg_2055/pg_2055.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2055@tree4234.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_57/pg_2057/pg_2057.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2057@tree4240.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_27/pg_2127/pg_2127.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2127@tree4426.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_94/pg_594/pg_594.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_594@tree890.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_61/pg_261/pg_261.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_261@tree145.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_57/pg_57/pg_57.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_57@tree777.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_87/pg_1087/pg_1087.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1087@tree2114.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_87/pg_1087/pg_1087.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1087@tree2115.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_90/pg_2690/pg_2690.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2690@tree6243.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_05/pg_605/pg_605.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_605@tree947.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_71/pg_271/pg_271.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_271@tree5017.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_61/pg_2661/pg_2661.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2661@tree6198.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_52/pg_2052/pg_2052.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2052@tree4228.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_03/pg_1103/pg_1103.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1103@tree2178.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_14/pg_14/pg_14.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_14@tree12.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_98/pg_2598/pg_2598.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2598@tree6020.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_00/pg_2000/pg_2000.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2000@tree4098.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_20/pg_20/pg_20.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_20@tree2162.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_01/pg_1101/pg_1101.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1101@tree2172.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_65/pg_2565/pg_2565.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2565@tree5708.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_94/pg_1094/pg_1094.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1094@tree2138.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_41/pg_2641/pg_2641.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2641@tree6160.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_99/pg_99/pg_99.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_99@tree5885.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_93/pg_93/pg_93.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_93@tree1411.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_98/pg_898/pg_898.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_898@tree1732.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_16/pg_216/pg_216.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_216@tree5865.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_01/pg_901/pg_901.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_901@tree1740.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_30/pg_2830/pg_2830.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2830@tree6583.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_31/pg_2831/pg_2831.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2831@tree6584.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_19/pg_719/pg_719.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_719@tree1296.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_75/pg_1975/pg_1975.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1975@tree4041.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_21/pg_1821/pg_1821.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1821@tree3678.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_81/pg_1581/pg_1581.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1581@tree3188.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_75/pg_1575/pg_1575.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1575@tree3164.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_73/pg_1573/pg_1573.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1573@tree3144.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_34/pg_934/pg_934.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_934@tree1832.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_00/pg_200/pg_200.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_200@tree6585.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_52/pg_152/pg_152.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_152@tree5743.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_53/pg_53/pg_53.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_53@tree1281.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_76/pg_2076/pg_2076.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2076@tree4282.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_50/pg_50/pg_50.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_50@tree1397.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_80/pg_80/pg_80.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_80@tree5881.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_24/pg_424/pg_424.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_424@tree532.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_82/pg_82/pg_82.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_82@tree5792.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_62/pg_1962/pg_1962.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1962@tree6580.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_15/pg_915/pg_915.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_915@tree1802.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_32/pg_32/pg_32.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_32@tree1775.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_15/pg_915/pg_915.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_915@tree1803.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_25/pg_2625/pg_2625.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2625@tree6140.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_30/pg_1130/pg_1130.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1130@tree2258.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_47/pg_2047/pg_2047.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2047@tree4217.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_86/pg_386/pg_386.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_386@tree459.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_39/pg_139/pg_139.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_139@tree5860.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_26/pg_126/pg_126.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_126@tree2233.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_36/pg_136/pg_136.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_136@tree5857.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_44/pg_1944/pg_1944.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1944@tree3959.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_28/pg_2828/pg_2828.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2828@tree6578.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_42/pg_142/pg_142.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_142@tree38.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_21/pg_21/pg_21.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_21@tree37.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_75/pg_75/pg_75.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_75@tree1743.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_41/pg_41/pg_41.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_41@tree1396.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_44/pg_2044/pg_2044.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2044@tree4212.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_16/pg_1916/pg_1916.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1916@tree3902.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_26/pg_926/pg_926.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_926@tree1825.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_33/pg_1133/pg_1133.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1133@tree5647.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_25/pg_625/pg_625.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_625@tree1016.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_42/pg_1842/pg_1842.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1842@tree3724.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_88/pg_288/pg_288.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_288@tree5028.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_85/pg_385/pg_385.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_385@tree458.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_43/pg_1843/pg_1843.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1843@tree3725.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_58/pg_1858/pg_1858.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1858@tree3754.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_94/pg_394/pg_394.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_394@tree483.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_52/pg_52/pg_52.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_52@tree463.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_12/pg_2712/pg_2712.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2712@tree6296.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_10/pg_2610/pg_2610.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2610@tree6117.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_50/pg_650/pg_650.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_650@tree1147.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_75/pg_275/pg_275.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_275@tree167.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_37/pg_37/pg_37.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_37@tree5871.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_73/pg_73/pg_73.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_73@tree5787.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_88/pg_88/pg_88.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_88@tree5848.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_72/pg_72/pg_72.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_72@tree801.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_83/pg_283/pg_283.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_283@tree184.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_30/pg_30/pg_30.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_30@tree2281.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_43/pg_1443/pg_1443.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1443@tree2917.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_40/pg_2140/pg_2140.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2140@tree4483.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_20/pg_2820/pg_2820.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2820@tree6566.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_83/pg_1483/pg_1483.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1483@tree2983.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_78/pg_1478/pg_1478.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1478@tree2974.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_74/pg_1474/pg_1474.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1474@tree2969.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_73/pg_1473/pg_1473.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1473@tree2967.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_53/pg_1453/pg_1453.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1453@tree2932.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_50/pg_1450/pg_1450.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1450@tree2926.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_84/pg_1384/pg_1384.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1384@tree2766.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_82/pg_1382/pg_1382.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1382@tree2763.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_18/pg_1318/pg_1318.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1318@tree2634.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_12/pg_1312/pg_1312.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1312@tree2628.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_65/pg_2165/pg_2165.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2165@tree4564.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_18/pg_1518/pg_1518.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1518@tree6333.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_98/pg_2898/pg_2898.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2898@tree6713.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_96/pg_2896/pg_2896.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2896@tree6709.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_64/pg_1264/pg_1264.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1264@tree2544.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_56/pg_56/pg_56.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_56@tree5821.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_48/pg_2648/pg_2648.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2648@tree6171.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_64/pg_2564/pg_2564.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2564@tree5699.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_81/pg_81/pg_81.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_81@tree5863.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_96/pg_1996/pg_1996.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1996@tree4089.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_46/pg_1446/pg_1446.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1446@tree2921.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_39/pg_2039/pg_2039.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2039@tree4198.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_42/pg_2042/pg_2042.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2042@tree4202.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_42/pg_1942/pg_1942.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1942@tree3962.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_68/pg_1868/pg_1868.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1868@tree3767.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_67/pg_1567/pg_1567.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1567@tree3137.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_44/pg_244/pg_244.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_244@tree3855.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_79/pg_2879/pg_2879.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2879@tree6674.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_12/pg_412/pg_412.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_412@tree2166.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_25/pg_225/pg_225.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_225@tree5991.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_67/pg_1867/pg_1867.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1867@tree3766.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_78/pg_1278/pg_1278.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1278@tree2572.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_68/pg_1268/pg_1268.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1268@tree2560.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_87/pg_787/pg_787.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_787@tree1489.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_46/pg_2046/pg_2046.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2046@tree5928.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_59/ot_859/ot_859.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_859@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_02/ot_502/ot_502.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_502@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_09/ot_709/ot_709.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_709@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_76/pg_2876/pg_2876.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2876@tree6670.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_26/pg_2926/pg_2926.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2926@tree6757.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_20/ot_120/ot_120.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_120@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_19/ot_119/ot_119.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_119@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_18/ot_118/ot_118.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_118@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_25/ot_425/ot_425.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_425@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_53/ot_753/ot_753.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_753@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_04/pg_2804/pg_2804.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2804@tree6511.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_02/ot_1002/ot_1002.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1002@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_31/ot_731/ot_731.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_731@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_66/pg_2866/pg_2866.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2866@tree6656.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_60/pg_2860/pg_2860.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2860@tree6646.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_22/ot_1022/ot_1022.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1022@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_50/ot_150/ot_150.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_150@tree3.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_70/ot_870/ot_870.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_870@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_56/ot_156/ot_156.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_156@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_53/ot_153/ot_153.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_153@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_30/ot_830/ot_830.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_830@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_51/ot_151/ot_151.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_151@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_54/ot_154/ot_154.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_154@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_55/ot_155/ot_155.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_155@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_52/ot_152/ot_152.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_152@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_57/ot_157/ot_157.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_157@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_58/ot_158/ot_158.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_158@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_04/ot_504/ot_504.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_504@tree3.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_59/ot_159/ot_159.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_159@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_94/ot_794/ot_794.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_794@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_44/ot_144/ot_144.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_144@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_36/ot_136/ot_136.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_136@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_89/ot_289/ot_289.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_289@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_73/ot_873/ot_873.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_873@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_16/ot_816/ot_816.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_816@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_46/ot_146/ot_146.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_146@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_71/pg_2371/pg_2371.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2371@tree4985.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_05/ot_305/ot_305.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_305@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_57/pg_2857/pg_2857.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2857@tree6628.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_87/pg_1887/pg_1887.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1887@tree6629.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_12/ot_812/ot_812.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_812@tree4.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_50/pg_2850/pg_2850.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2850@tree6620.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_55/ot_655/ot_655.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_655@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_44/pg_2444/pg_2444.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2444@tree6526.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_69/ot_769/ot_769.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_769@tree3.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_70/pg_2870/pg_2870.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2870@tree6662.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_71/pg_2871/pg_2871.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2871@tree6663.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_66/ot_166/ot_166.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_166@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_61/ot_161/ot_161.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_161@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_60/ot_160/ot_160.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_160@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_62/ot_162/ot_162.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_162@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_64/ot_164/ot_164.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_164@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_65/ot_165/ot_165.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_165@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_67/ot_167/ot_167.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_167@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_13/ot_313/ot_313.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_313@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_79/pg_1979/pg_1979.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1979@tree6300.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_12/ot_312/ot_312.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_312@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_05/pg_2805/pg_2805.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2805@tree6512.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_06/pg_2806/pg_2806.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2806@tree6529.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_12/ot_112/ot_112.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_112@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_53/pg_2853/pg_2853.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2853@tree6624.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_65/pg_2865/pg_2865.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2865@tree6654.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_23/ot_123/ot_123.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_123@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_72/pg_2872/pg_2872.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2872@tree6665.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_25/ot_125/ot_125.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_125@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_26/ot_126/ot_126.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_126@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_15/ot_415/ot_415.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_415@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_72/pg_1872/pg_1872.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1872@tree3780.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_06/ot_806/ot_806.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_806@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_98/pg_2798/pg_2798.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2798@tree6497.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_86/ot_786/ot_786.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_786@Tr53559.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_64/pg_1764/pg_1764.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1764@tree6299.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_37/ot_137/ot_137.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_137@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_40/ot_140/ot_140.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_140@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_04/ot_104/ot_104.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_104@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_42/ot_142/ot_142.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_142@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_38/ot_138/ot_138.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_138@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_64/pg_2864/pg_2864.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2864@tree6651.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_20/ot_820/ot_820.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_820@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_39/ot_139/ot_139.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_139@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_62/ot_862/ot_862.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_862@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_16/pg_2416/pg_2416.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2416@tree3.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_33/ot_533/ot_533.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_533@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_73/ot_773/ot_773.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_773@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_67/ot_867/ot_867.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_867@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_16/ot_116/ot_116.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_116@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_48/ot_148/ot_148.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_148@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_49/ot_149/ot_149.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_149@tree4.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_35/ot_835/ot_835.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_835@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_37/ot_837/ot_837.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_837@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_46/ot_846/ot_846.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_846@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_21/ot_121/ot_121.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_121@tree7.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_69/pg_2869/pg_2869.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2869@tree6661.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_22/ot_122/ot_122.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_122@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_64/ot_864/ot_864.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_864@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_24/ot_124/ot_124.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_124@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_29/ot_129/ot_129.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_129@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_47/ot_147/ot_147.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_147@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_38/ot_838/ot_838.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_838@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_47/ot_747/ot_747.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_747@tree3.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_96/pg_2796/pg_2796.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2796@tree6491.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_53/pg_1953/pg_1953.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1953@tree3977.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_66/ot_866/ot_866.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_866@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_54/pg_2454/pg_2454.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2454@tree5247.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_90/pg_2890/pg_2890.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2890@tree6701.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_15/ot_815/ot_815.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_815@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_66/pg_1966/pg_1966.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1966@tree4019.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_74/ot_174/ot_174.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_174@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_68/ot_768/ot_768.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_768@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_24/ot_824/ot_824.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_824@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_75/pg_2875/pg_2875.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2875@tree6668.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_63/ot_763/ot_763.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_763@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_23/ot_823/ot_823.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_823@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_53/ot_853/ot_853.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_853@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_02/pg_2702/pg_2702.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2702@tree6274.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_20/ot_520/ot_520.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_520@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_63/ot_863/ot_863.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_863@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_72/ot_172/ot_172.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_172@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_45/pg_2845/pg_2845.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2845@tree6606.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_54/pg_1854/pg_1854.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1854@tree3743.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_82/ot_882/ot_882.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_882@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_99/pg_2599/pg_2599.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2599@tree6021.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_76/ot_176/ot_176.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_176@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_77/ot_177/ot_177.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_177@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_34/ot_834/ot_834.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_834@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_78/ot_178/ot_178.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_178@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_03/ot_103/ot_103.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_103@tree4.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_14/ot_914/ot_914.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_914@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_32/ot_832/ot_832.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_832@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_86/pg_1586/pg_1586.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1586@tree3208.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_32/pg_2332/pg_2332.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2332@tree4912.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_05/pg_2105/pg_2105.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2105@tree4360.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_22/ot_822/ot_822.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_822@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_56/ot_856/ot_856.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_856@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_10/ot_110/ot_110.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_110@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_94/ot_894/ot_894.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_894@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_49/ot_749/ot_749.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_749@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_48/ot_848/ot_848.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_848@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_80/ot_180/ot_180.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_180@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_79/ot_179/ot_179.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_179@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_80/ot_880/ot_880.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_880@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_58/pg_2858/pg_2858.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2858@tree6642.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_27/ot_827/ot_827.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_827@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_74/pg_2874/pg_2874.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2874@tree6667.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_72/ot_172/ot_172.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_172@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_92/pg_2692/pg_2692.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2692@tree6245.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_13/ot_113/ot_113.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_113@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_07/pg_2707/pg_2707.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2707@tree6281.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_91/pg_2591/pg_2591.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2591@tree6024.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_91/ot_891/ot_891.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_891@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_29/pg_2829/pg_2829.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2829@tree6579.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_01/ot_101/ot_101.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_101@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_02/ot_102/ot_102.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_102@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_69/ot_169/ot_169.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_169@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_24/pg_2924/pg_2924.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2924@tree6755.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_71/ot_171/ot_171.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_171@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_70/ot_170/ot_170.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_170@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_73/ot_173/ot_173.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_173@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_00/pg_2600/pg_2600.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2600@tree6022.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_75/ot_175/ot_175.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_175@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_83/ot_783/ot_783.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_783@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_43/ot_843/ot_843.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_843@tree3.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_70/ot_770/ot_770.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_770@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_75/pg_2575/pg_2575.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2575@tree5974.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_13/pg_2913/pg_2913.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2913@tree6742.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_11/ot_111/ot_111.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_111@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_72/ot_172/ot_172.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_172@tree3.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_90/ot_290/ot_290.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_290@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_15/pg_2015/pg_2015.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2015@tree4152.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_54/ot_854/ot_854.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_854@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_55/ot_855/ot_855.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_855@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_41/ot_841/ot_841.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_841@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_36/ot_836/ot_836.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_836@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_74/ot_874/ot_874.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_874@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_04/pg_2404/pg_2404.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2404@tree5068.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_57/ot_757/ot_757.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_757@Tr70438.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_12/ot_412/ot_412.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_412@Tr77157.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_32/ot_532/ot_532.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_532@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_82/ot_782/ot_782.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_782@Tr48736.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_31/ot_831/ot_831.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_831@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_69/ot_869/ot_869.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_869@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_47/ot_847/ot_847.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_847@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_00/ot_500/ot_500.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_500@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_31/ot_531/ot_531.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_531@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_13/pg_2913/pg_2913.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2913@tree6741.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_09/ot_809/ot_809.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_809@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_21/ot_521/ot_521.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_521@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_64/ot_764/ot_764.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_764@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_77/pg_2577/pg_2577.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2577@tree5980.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_20/pg_420/pg_420.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_420@tree522.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_14/ot_314/ot_314.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_314@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_61/pg_2861/pg_2861.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2861@tree6647.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_59/pg_2859/pg_2859.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2859@tree6643.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_97/pg_1797/pg_1797.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1797@tree3635.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_44/pg_2844/pg_2844.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2844@tree6605.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_43/pg_2843/pg_2843.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2843@tree6604.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_25/pg_2825/pg_2825.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2825@tree6572.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_95/pg_2695/pg_2695.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2695@tree6250.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_56/pg_2656/pg_2656.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2656@tree6185.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_00/pg_1600/pg_1600.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1600@tree3231.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_88/pg_2688/pg_2688.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2688@tree6240.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_59/pg_2359/pg_2359.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2359@tree4962.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_87/pg_2687/pg_2687.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2687@tree6239.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_91/pg_2691/pg_2691.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2691@tree6244.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_85/pg_2685/pg_2685.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2685@tree6235.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_68/ot_168/ot_168.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_168@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_54/ot_254/ot_254.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_254@Tr87680.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_34/pg_1634/pg_1634.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1634@tree3303.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_27/pg_1927/pg_1927.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1927@tree6215.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_87/pg_2587/pg_2587.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2587@tree5998.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_81/pg_1981/pg_1981.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1981@tree4052.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_84/pg_2684/pg_2684.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2684@tree6644.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_28/pg_1428/pg_1428.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1428@tree2855.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_46/pg_1646/pg_1646.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1646@tree6231.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_33/pg_2833/pg_2833.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2833@tree6588.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_34/pg_2834/pg_2834.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2834@tree6589.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_16/pg_2816/pg_2816.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2816@tree6556.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_41/pg_2741/pg_2741.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2741@tree6645.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_89/pg_2589/pg_2589.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2589@tree6001.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_55/pg_2655/pg_2655.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2655@tree6181.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_97/pg_1997/pg_1997.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1997@tree6183.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_54/pg_2654/pg_2654.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2654@tree6179.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_85/pg_2585/pg_2585.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2585@tree5994.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_53/pg_2653/pg_2653.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2653@tree6178.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_57/pg_2657/pg_2657.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2657@tree6191.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_51/pg_2551/pg_2551.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2551@tree6180.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_76/pg_2576/pg_2576.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2576@tree5975.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_70/pg_1870/pg_1870.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1870@tree3769.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_79/ot_979/ot_979.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_979@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_59/pg_2659/pg_2659.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2659@tree6195.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_81/ot_181/ot_181.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_181@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_50/ot_750/ot_750.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_750@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_14/ot_814/ot_814.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_814@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_81/pg_2881/pg_2881.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2881@tree6680.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_43/pg_2143/pg_2143.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2143@tree4505.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_98/pg_2098/pg_2098.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2098@tree6487.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_51/pg_2851/pg_2851.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2851@tree6621.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_15/pg_2415/pg_2415.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2415@tree5096.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_23/pg_423/pg_423.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_423@tree2857.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_73/pg_2573/pg_2573.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2573@tree5959.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_11/pg_2711/pg_2711.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2711@tree6295.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_07/ot_307/ot_307.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_307@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_60/pg_2460/pg_2460.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2460@tree5285.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_52/pg_1252/pg_1252.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1252@tree2661.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_36/pg_1336/pg_1336.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1336@tree2660.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_48/pg_1948/pg_1948.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1948@tree6513.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_96/pg_1796/pg_1796.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1796@tree6514.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_43/pg_2243/pg_2243.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2243@tree6515.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_70/pg_2670/pg_2670.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2670@tree6214.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_71/pg_2671/pg_2671.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2671@tree6216.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_73/pg_2673/pg_2673.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2673@tree6219.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_74/pg_2674/pg_2674.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2674@tree6220.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_75/pg_2675/pg_2675.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2675@tree6221.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_76/pg_2676/pg_2676.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2676@tree6222.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_77/pg_2677/pg_2677.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2677@tree6223.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_82/pg_2682/pg_2682.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2682@tree6227.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_83/pg_2683/pg_2683.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2683@tree6228.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_07/pg_2807/pg_2807.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2807@tree6519.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_08/pg_2808/pg_2808.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2808@tree6522.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_67/pg_2667/pg_2667.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2667@tree6211.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_38/pg_2838/pg_2838.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2838@tree6594.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_87/pg_2087/pg_2087.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2087@tree4323.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_88/pg_1988/pg_1988.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1988@tree4074.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_93/pg_2593/pg_2593.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2593@tree6247.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_14/pg_2614/pg_2614.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2614@tree6121.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_28/pg_2628/pg_2628.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2628@tree6143.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_23/pg_2323/pg_2323.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2323@tree6537.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_40/pg_1940/pg_1940.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1940@tree3943.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_37/pg_437/pg_437.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_437@tree6242.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_94/pg_2594/pg_2594.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2594@tree6014.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_57/pg_2357/pg_2357.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2357@tree6538.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_00/ot_1000/ot_1000.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1000@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_51/pg_251/pg_251.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_251@tree134.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_49/pg_1849/pg_1849.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1849@tree3731.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_11/pg_2811/pg_2811.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2811@tree6533.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_04/pg_2604/pg_2604.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2604@tree6043.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_63/pg_1563/pg_1563.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1563@tree6170.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_64/pg_2664/pg_2664.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2664@tree6201.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_76/pg_1776/pg_1776.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1776@tree3581.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_85/ot_185/ot_185.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_185@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_37/pg_1337/pg_1337.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1337@tree6167.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_29/pg_2629/pg_2629.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2629@tree6162.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_56/pg_2156/pg_2156.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2156@tree5953.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_38/pg_1338/pg_1338.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1338@tree2666.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_22/pg_2422/pg_2422.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2422@tree5117.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_82/ot_182/ot_182.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_182@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_83/ot_183/ot_183.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_183@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_61/pg_2061/pg_2061.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2061@tree4245.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_68/pg_2068/pg_2068.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2068@tree6488.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_05/pg_2405/pg_2405.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2405@tree6669.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_50/ot_650/ot_650.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_650@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_66/pg_1366/pg_1366.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1366@tree6166.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_92/pg_2092/pg_2092.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2092@tree4335.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_44/pg_2544/pg_2544.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2544@tree6482.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_09/pg_2709/pg_2709.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2709@tree6290.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_08/pg_2708/pg_2708.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2708@tree6289.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_43/pg_1343/pg_1343.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1343@tree6255.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_78/pg_2678/pg_2678.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2678@tree6224.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_21/pg_421/pg_421.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_421@tree523.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_10/pg_2710/pg_2710.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2710@tree6291.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_40/pg_1340/pg_1340.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1340@tree2669.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_59/ot_659/ot_659.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_659@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_42/ot_642/ot_642.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_642@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_36/ot_736/ot_736.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_736@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_05/ot_505/ot_505.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_505@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_41/ot_741/ot_741.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_741@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_22/ot_722/ot_722.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_722@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_05/ot_805/ot_805.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_805@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_11/ot_811/ot_811.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_811@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_08/ot_508/ot_508.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_508@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_09/ot_509/ot_509.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_509@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_49/ot_649/ot_649.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_649@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_35/pg_335/pg_335.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_335@tree360.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_38/pg_338/pg_338.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_338@tree5527.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_39/pg_339/pg_339.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_339@tree365.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_43/pg_343/pg_343.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_343@tree5534.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_48/pg_348/pg_348.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_348@tree381.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_49/pg_349/pg_349.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_349@tree5539.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_53/pg_353/pg_353.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_353@tree5542.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_58/pg_358/pg_358.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_358@tree406.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_66/pg_366/pg_366.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_366@tree5552.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_67/pg_367/pg_367.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_367@tree418.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_68/pg_368/pg_368.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_368@tree5553.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_69/pg_369/pg_369.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_369@tree5554.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_70/pg_370/pg_370.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_370@tree426.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_72/pg_372/pg_372.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_372@tree431.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_73/pg_373/pg_373.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_373@tree432.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_74/pg_374/pg_374.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_374@tree433.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_75/pg_375/pg_375.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_375@tree436.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_76/pg_376/pg_376.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_376@tree438.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_80/pg_380/pg_380.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_380@tree5560.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_82/pg_382/pg_382.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_382@tree449.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_87/pg_387/pg_387.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_387@tree5562.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_89/pg_389/pg_389.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_389@tree470.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_93/pg_393/pg_393.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_393@tree482.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_97/pg_397/pg_397.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_397@tree494.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_99/pg_399/pg_399.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_399@tree5565.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_00/pg_400/pg_400.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_400@tree497.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_02/pg_402/pg_402.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_402@tree5570.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_03/pg_403/pg_403.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_403@tree503.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_05/pg_405/pg_405.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_405@tree507.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_07/pg_407/pg_407.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_407@tree513.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_08/pg_408/pg_408.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_408@tree5571.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_11/pg_411/pg_411.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_411@tree518.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_14/pg_414/pg_414.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_414@tree519.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_30/pg_430/pg_430.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_430@tree541.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_41/pg_441/pg_441.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_441@tree5575.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_44/pg_444/pg_444.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_444@tree564.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_46/pg_446/pg_446.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_446@tree565.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_47/pg_447/pg_447.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_447@tree5576.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_48/pg_448/pg_448.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_448@tree5577.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_49/pg_449/pg_449.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_449@tree570.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_50/pg_450/pg_450.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_450@tree574.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_70/pg_470/pg_470.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_470@tree615.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_71/pg_471/pg_471.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_471@tree617.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_73/pg_473/pg_473.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_473@tree623.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_74/pg_474/pg_474.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_474@tree627.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_75/pg_475/pg_475.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_475@tree5594.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_77/pg_477/pg_477.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_477@tree633.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_79/pg_479/pg_479.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_479@tree636.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_80/pg_480/pg_480.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_480@tree637.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_81/pg_481/pg_481.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_481@tree644.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_82/pg_482/pg_482.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_482@tree5595.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_83/pg_483/pg_483.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_483@tree647.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_01/ot_701/ot_701.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_701@Tr90392.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_03/ot_703/ot_703.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_703@Tr88391.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_05/ot_705/ot_705.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_705@Tr93612.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_66/ot_466/ot_466.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_466@Tr89358.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_97/ot_997/ot_997.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_997@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_48/pg_2448/pg_2448.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2448@tree5223.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_39/pg_2739/pg_2739.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2739@tree6601.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_54/pg_2554/pg_2554.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2554@tree5580.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_15/pg_2715/pg_2715.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2715@tree6308.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_53/pg_2753/pg_2753.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2753@tree6360.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_63/pg_263/pg_263.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_263@tree149.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_42/pg_2542/pg_2542.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2542@tree5590.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_37/pg_2737/pg_2737.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2737@tree6322.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_38/pg_2738/pg_2738.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2738@tree6323.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_38/pg_2738/pg_2738.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2738@tree6324.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_92/pg_2892/pg_2892.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2892@tree6700.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_91/pg_2891/pg_2891.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2891@tree6699.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_06/ot_106/ot_106.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_106@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_31/pg_2731/pg_2731.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2731@tree6428.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_13/pg_2713/pg_2713.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2713@tree6309.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_42/pg_2742/pg_2742.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2742@tree6342.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_57/pg_2757/pg_2757.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2757@tree6369.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_53/pg_2553/pg_2553.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2553@tree5579.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_56/pg_2556/pg_2556.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2556@tree5586.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_12/pg_312/pg_312.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_312@tree264.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_13/pg_313/pg_313.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_313@tree6681.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_84/pg_2484/pg_2484.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2484@tree6607.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_49/pg_2849/pg_2849.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2849@tree6615.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_22/pg_2822/pg_2822.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2822@tree6569.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_24/ot_624/ot_624.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_624@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_11/ot_711/ot_711.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_711@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_44/ot_44/ot_44.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_44@Tr64893.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_19/ot_19/ot_19.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_19@Tr63070.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_08/pg_108/pg_108.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_108@tree4130.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_22/pg_422/pg_422.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_422@tree530.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_78/ot_278/ot_278.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_278@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_97/ot_97/ot_97.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_97@tree4.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_88/ot_488/ot_488.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_488@Tr77496.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_04/pg_2404/pg_2404.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2404@tree6388.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_23/ot_623/ot_623.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_623@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_97/ot_597/ot_597.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_597@Tr53543.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_71/pg_2071/pg_2071.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2071@tree4264.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_30/ot_530/ot_530.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_530@Tr81397.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_31/ot_331/ot_331.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_331@Tr77751.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_40/ot_340/ot_340.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_340@Tr52077.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_47/pg_2647/pg_2647.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2647@tree6169.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_53/ot_453/ot_453.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_453@Tr87992.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_79/pg_1879/pg_1879.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1879@tree3796.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_18/pg_2618/pg_2618.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2618@tree6130.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_89/ot_389/ot_389.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_389@Tr63300.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_15/ot_115/ot_115.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_115@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_27/pg_827/pg_827.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_827@tree1585.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_26/ot_26/ot_26.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_26@Tr3688.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_16/pg_2916/pg_2916.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2916@tree6744.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_17/ot_317/ot_317.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_317@Tr53059.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_58/ot_458/ot_458.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_458@Tr80994.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_27/pg_2927/pg_2927.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2927@tree6760.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_43/ot_443/ot_443.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_443@Tr74361.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_04/pg_404/pg_404.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_404@tree505.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_12/pg_2812/pg_2812.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2812@tree6545.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_31/ot_131/ot_131.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_131@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_57/ot_657/ot_657.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_657@tree4.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_35/ot_535/ot_535.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_535@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_34/ot_534/ot_534.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_534@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_46/ot_546/ot_546.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_546@Tr85942.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_05/ot_105/ot_105.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_105@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_14/ot_114/ot_114.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_114@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_32/ot_132/ot_132.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_132@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_18/ot_218/ot_218.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_218@tree4.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_21/ot_221/ot_221.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_221@Tr72273.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_26/ot_26/ot_26.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_26@Tr3687.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_35/ot_435/ot_435.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_435@Tr70597.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_45/ot_445/ot_445.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_445@Tr75519.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_79/pg_1879/pg_1879.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1879@tree3798.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_47/ot_447/ot_447.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_447@Tr75532.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_55/ot_555/ot_555.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_555@Tr92138.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_59/ot_559/ot_559.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_559@Tr70451.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_47/ot_647/ot_647.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_647@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_80/pg_580/pg_580.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_580@tree856.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_17/pg_1217/pg_1217.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1217@tree2455.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_32/pg_1632/pg_1632.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1632@tree3298.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_01/pg_2701/pg_2701.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2701@tree6271.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_75/pg_2775/pg_2775.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2775@tree6432.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_93/pg_2793/pg_2793.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2793@tree6705.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_13/pg_2813/pg_2813.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2813@tree6550.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_89/pg_2889/pg_2889.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2889@tree6698.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_14/pg_2814/pg_2814.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2814@tree6551.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_52/ot_752/ot_752.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_752@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_06/ot_306/ot_306.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_306@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_16/ot_1016/ot_1016.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1016@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_19/ot_1019/ot_1019.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1019@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_19/ot_1019/ot_1019.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1019@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_19/ot_1019/ot_1019.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1019@tree3.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_19/ot_1019/ot_1019.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1019@tree4.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_20/ot_1020/ot_1020.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1020@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_23/ot_1023/ot_1023.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1023@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_24/ot_1024/ot_1024.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1024@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_25/ot_1025/ot_1025.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1025@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_25/ot_1025/ot_1025.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1025@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_27/ot_1027/ot_1027.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1027@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_27/ot_1027/ot_1027.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1027@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_29/ot_1029/ot_1029.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1029@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_30/ot_1030/ot_1030.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1030@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_32/ot_1032/ot_1032.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1032@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_34/ot_1034/ot_1034.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1034@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_37/ot_1037/ot_1037.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1037@tree3.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_42/pg_1242/pg_1242.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1242@tree2507.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_39/ot_1039/ot_1039.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1039@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_41/ot_1041/ot_1041.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1041@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_42/ot_1042/ot_1042.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1042@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_70/pg_2770/pg_2770.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2770@tree6417.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_45/ot_1045/ot_1045.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1045@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_46/ot_1046/ot_1046.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1046@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_47/ot_1047/ot_1047.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1047@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_48/ot_1048/ot_1048.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1048@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_53/ot_1053/ot_1053.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1053@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_54/ot_1054/ot_1054.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1054@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_28/ot_328/ot_328.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_328@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_56/ot_1056/ot_1056.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1056@Tr66754.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_58/ot_1058/ot_1058.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1058@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_62/ot_1062/ot_1062.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1062@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_64/ot_1064/ot_1064.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1064@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_67/ot_1067/ot_1067.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1067@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_68/ot_1068/ot_1068.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1068@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_70/ot_1070/ot_1070.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1070@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_72/ot_1072/ot_1072.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1072@Tr77370.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_75/ot_1075/ot_1075.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1075@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_79/ot_1079/ot_1079.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1079@tree3.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_88/ot_1088/ot_1088.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1088@Tr102832.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_85/ot_1085/ot_1085.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1085@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_90/ot_1090/ot_1090.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1090@Tr99739.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_86/ot_1086/ot_1086.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1086@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_73/ot_1073/ot_1073.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1073@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_92/ot_1092/ot_1092.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1092@Tr29847.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_05/ot_1105/ot_1105.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1105@Tr76750.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_05/ot_1105/ot_1105.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1105@Tr76754.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_05/ot_1105/ot_1105.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1105@Tr76753.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_05/ot_1105/ot_1105.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1105@Tr76755.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_05/ot_1105/ot_1105.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1105@Tr76757.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_05/ot_1105/ot_1105.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1105@Tr76756.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_05/ot_1105/ot_1105.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1105@Tr76751.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_05/ot_1105/ot_1105.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1105@Tr76752.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_06/ot_1106/ot_1106.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1106@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_12/ot_1112/ot_1112.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1112@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_01/ot_1101/ot_1101.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1101@tree3.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_14/ot_1114/ot_1114.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1114@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_00/ot_1100/ot_1100.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1100@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_98/ot_1098/ot_1098.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1098@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_17/ot_1117/ot_1117.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1117@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_18/ot_1118/ot_1118.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1118@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_20/ot_1120/ot_1120.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1120@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_24/ot_1124/ot_1124.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1124@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_25/ot_1125/ot_1125.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1125@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_93/ot_1093/ot_1093.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1093@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_95/ot_1095/ot_1095.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1095@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_32/ot_1132/ot_1132.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1132@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_30/ot_1130/ot_1130.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1130@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_34/ot_1134/ot_1134.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1134@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_35/ot_1135/ot_1135.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1135@tree4.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_38/ot_1138/ot_1138.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1138@Tr89262.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_39/ot_1139/ot_1139.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1139@Tr97436.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_40/ot_1140/ot_1140.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1140@Tr103257.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_41/ot_1141/ot_1141.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1141@Tr88900.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_42/ot_1142/ot_1142.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1142@Tr91759.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_47/ot_1147/ot_1147.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1147@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_59/ot_1059/ot_1059.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1059@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_50/ot_1150/ot_1150.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1150@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_59/ot_1159/ot_1159.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1159@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_61/ot_1161/ot_1161.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1161@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_62/ot_1162/ot_1162.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1162@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_55/pg_155/pg_155.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_155@tree780.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_64/ot_1164/ot_1164.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1164@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_65/ot_1165/ot_1165.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1165@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_67/ot_1167/ot_1167.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1167@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_74/ot_1174/ot_1174.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1174@tree3.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_75/ot_1175/ot_1175.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1175@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_76/ot_1176/ot_1176.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1176@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_89/pg_2089/pg_2089.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_2089@tree4326.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_82/ot_1182/ot_1182.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1182@Tr43239.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_82/ot_1182/ot_1182.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1182@Tr43256.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_82/ot_1182/ot_1182.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1182@Tr43234.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_82/ot_1182/ot_1182.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1182@Tr43272.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_84/ot_1184/ot_1184.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1184@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_85/ot_1185/ot_1185.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1185@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_98/ot_1198/ot_1198.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1198@Tr97555.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_98/ot_1198/ot_1198.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1198@Tr97554.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_09/ot_1209/ot_1209.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1209@Tr96307.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_08/ot_1208/ot_1208.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1208@Tr99854.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_12/ot_1212/ot_1212.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1212@tree12.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_15/ot_1215/ot_1215.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1215@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_15/ot_1215/ot_1215.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1215@tree2.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_16/ot_1216/ot_1216.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1216@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_03/ot_303/ot_303.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_303@Tr62284.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_07/ot_607/ot_607.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_607@Tr25497.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_95/pg_295/pg_295.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_295@tree203.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_50/ot_1050/ot_1050.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1050@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_64/pg_1864/pg_1864.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1864@tree3763.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_02/pg_1902/pg_1902.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_1902@tree3879.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_99/pg_999/pg_999.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_999@tree1940.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/pg_54/pg_154/pg_154.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/pg_154@tree782.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_33/ot_1233/ot_1233.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1233@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_34/ot_1234/ot_1234.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1234@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_35/ot_1235/ot_1235.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1235@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_36/ot_1236/ot_1236.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1236@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_29/ot_1229/ot_1229.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1229@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_39/ot_1239/ot_1239.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1239@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_41/ot_1241/ot_1241.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1241@Tr103639.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_46/ot_1246/ot_1246.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1246@Tr108958.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_45/ot_1245/ot_1245.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1245@Tr87460.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_48/ot_1248/ot_1248.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1248@Tr92236.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_49/ot_1249/ot_1249.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1249@Tr93670.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_11/ot_311/ot_311.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_311@tree1.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_47/ot_1247/ot_1247.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1247@Tr74849.json" export_studies_from_collection.py: cp "/home/bredelings/Devel/OpenTree/phylesystem/shards/phylesystem-1/study/ot_53/ot_1253/ot_1253.json" "/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/ot_1253@tree1.json" export_studies_from_collection.py: 976 total trees export_studies_from_collection.py: 976 JSON files copied /home/bredelings/Devel/OpenTree/peyotl/scripts/collection_export.py \ --export=studyID_treeID \ /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/concrete_rank_collection.json \ >/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/study_tree_pairs.txt sed -e "s:\(.*\):/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_phylo/\1.tre:" /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/study_tree_pairs.txt > /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/exemplified_phylo/args.txt if ! diff /home/bredelings/Devel/OpenTree/ott-3.0/version.txt /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/ott_version.txt >/dev/null 2>&1 ; then cp /home/bredelings/Devel/OpenTree/ott-3.0/version.txt /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/ott_version.txt ; fi ./bin/config_checker.py taxonomy.cleaning_flags /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/config > /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/.raw_cleaning_flags.txt if ! diff /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/.raw_cleaning_flags.txt /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/cleaning_flags.txt 2>/dev/null; then mv /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/.raw_cleaning_flags.txt /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/cleaning_flags.txt ; fi if ! ./bin/config_checker.py synthesis.root_ott_id /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/config > /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/.raw_root_ott_id.txt 2>/dev/null ; then \ otc-taxonomy-parser --config /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/config -R | sed 's/[ \t].*//' > /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/.raw_root_ott_id.txt ; \ fi ; \ if ! diff /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/.raw_root_ott_id.txt /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/root_ott_id.txt 2>/dev/null; then mv /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/.raw_root_ott_id.txt /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/root_ott_id.txt ; fi /home/bredelings/Devel/OpenTree/peyotl/scripts/ott/suppress_by_flag.py \ --ott-dir=/home/bredelings/Devel/OpenTree/ott-3.0 \ --output=/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/cleaned_ott_with_hiddenbarren.tre \ --log=/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/cleaned_ott_1.json \ --flags="major_rank_conflict,major_rank_conflict_inherited,environmental,viral,barren,not_otu,hidden,was_container,inconsistent,hybrid,merged" \ --root="93302" otc-relabel-tree \ /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/cleaned_ott_with_hiddenbarren.tre \ --del-higher-taxon-tips \ -j/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/cleaned_ott_pruned_nonflagged.json \ --taxonomy /home/bredelings/Devel/OpenTree/ott-3.0 > /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/cleaned_ott.tre if ! diff /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/cleaning_flags.txt /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_phylo/cleaning_flags.txt >/dev/null 2>&1 && \ ! diff /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/root_ott_id.txt /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_phylo/root_ott_id.txt >/dev/null 2>&1 ; \ then \ sed -e "s:\(.*\):/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/\1.json:" < /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/study_tree_pairs.txt > /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_phylo/x ; \ bin/convert-space-to-newline /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_phylo/x > /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_phylo/needs_updating.txt ;\ rm -f /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_phylo/x ;\ else \ ./bin/write-needs-updating /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_phylo $(sed -e 's:\(.*\):/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_snapshot/\1.json:' < /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/phylo_input/study_tree_pairs.txt) > /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_phylo/needs_updating.txt ;\ fi cp /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/cleaning_flags.txt /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_phylo/cleaning_flags.txt cp /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/root_ott_id.txt /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_phylo/root_ott_id.txt /home/bredelings/Devel/OpenTree/peyotl/scripts/nexson/prune_to_clean_mapped.py \ --ott-dir=/home/bredelings/Devel/OpenTree/ott-3.0 \ --input-files-list=/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_phylo/needs_updating.txt \ --out-dir=/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_phylo \ --ott-prune-flags="major_rank_conflict,major_rank_conflict_inherited,environmental,viral,barren,not_otu,hidden,was_container,inconsistent,hybrid,merged" \ --ott-prune-nonflagged-json=/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/cleaned_ott_pruned_nonflagged.json \ --root="93302" touch /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_phylo/phylo_inputs_cleaned.txt otc-nonterminals-to-exemplars \ -e/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/exemplified_phylo \ /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/cleaned_ott/cleaned_ott.tre \ -f/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/exemplified_phylo/args.txt \ -j/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/exemplified_phylo/exemplified_log.json \ -n/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/exemplified_phylo/.nonempty_trees.txt && mv \ /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/exemplified_phylo/.nonempty_trees.txt \ /home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/exemplified_phylo/nonempty_trees.txt otc-regraft-taxonomy-generator \ --in-tree=/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/exemplified_phylo/taxonomy.tre \ --config=/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/config \ /home/bredelings/Devel/OpenTree/ott-3.0 \ --json=/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/exemplified_phylo/pruned_for_regraft_cleaned_ott.json \ >/home/bredelings/Devel/OpenTree/synth-runs/v10.3-4/exemplified_phylo/regraft_cleaned_ott.tre