The files in this directory (and its children) were produced using propinquity, a make-based pipeline for phylogenetic supertrees.
The Open Tree of Life version is opentree12.3
.
The configuration file for the propinquity run was at: /home/opentree/synth/in_progress_tree_builds/bumpedopentree12.3/config
/home/opentree/synth/ott/ott3.2.0-bumped-tree-12.3
The phylesystem shards for this run were located under /home/opentree/synth/phylesystem
The collections shards for this run were located under /home/opentree/synth/phylesystem
. 11 collections were used, ranked in this order:
unknown
and git SHA unknown/home/opentree/synth/peyotl
0.1.4dev
and git SHA 4c3e468dceb2866fe0e8ce9a276f1f661871b6fbLogs for these steps are here (stdout) and here (stderr)
Logs for these steps are here (stdout) and here (stderr)
See annotated_supertree/index.html links to the annotations for that tree.
Logs for these steps are here (stdout) and here (stderr)
See assessments/index.html discusses what tests were run to assess the supertree.
Logs for these steps are here (stdout) and here (stderr)
Logs for the HTML generation steps are here (stdout) and here (stderr)
An index for all of the logs is available here